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SRX18702809: Shotgun sequencing of Peperomia cookiana (HPDL)
1 ILLUMINA (Illumina NovaSeq 6000) run: 13.8M spots, 4.1G bases, 1.3Gb downloads

Design: WGS with KAPA HyperPlus kit with PCR
Submitted by: University of Hawai'i
Study: Low pass sequencing of Hawaiian native plants
show Abstracthide Abstract
DNA from plants can often be acquired from herbarium specimens, which can be particularly useful for plants that are hard to access or species that have few individuals in the wild. Here we compared DNA from herbarium specimens to freezer-stored specimens for low pass genome skimming and chloroplast assembly to determine whether storage condition and age had an affect on DNA quality and sequencing output.
Sample: Peperomia cookiana (HPDL)
SAMN32180119 • SRS16143884 • All experiments • All runs
Library:
Name: hpdl20
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 13.8M spots, 4.1G bases, 1.3Gb
Run# of Spots# of BasesSizePublished
SRR2274145413,800,5714.1G1.3Gb2022-12-14

ID:
25768116

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